Production Assemblies
This page contains links to many of the genomes we have assembled at CBCB. The "Data download"
link will take you to a page where you can get the assembly of the genome itself, along with
genome annotation (in some cases). The "Lab notes" link on some of these genomes contains
information about the particular techniques and tricks we used to assemble each genome.
See the Genome Assembly page for more information on our
research on assembly algorithms.
Drosophila (fruit fly) endosymbionts
Steven Salzberg and colleagues identified the sequence of the bacterial
endosymbiont Wolbachia
within the publicly available sequence data of several species of fruit
fly. These results were reported in the open access journal
Genome Biology:
Salzberg,
S.L., Hotopp, J.C., Delcher, A.L., Pop, M., Smith, D.R., Eisen, M.B.,
Nelson, W.C. (2005) Serendipitous discovery of Wolbachia
genomes in multiple Drosophila species. Genome Biol 6
(3):R23.
The assemblies of the endosymbiont genomes were performed with AMOScmp, and
they can be obtained from:
Wolbachia endosymbiont of Drosophila annanasae - GenBank
entry
Wolbachia endosymbiont of Drosophila simulans - GenBank
entry
Wolbachia endosymbiont of Drosophila willistoni - (contigs)
(trace
IDs)
*Assemblies completed in partnership with TIGR
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