This file contains two programs for finding repeats in genomic
DNA sequences.  The program described in the paper by Volfovsky
et al. (2001) in the journal Genome Biology is called here
RepeatFinder.  A second program, designed specifically to find
repeats likely to confuse a genome assembly, is called
ClosureRepeatFinder.  The two programs are quite different and
have different purposes; RepeatFinder is intended to be the more
comprehensive approach.  Both are open source; note that RepeatFinder
depends on Stefan Kurtz's REPuter, which used to be at
  http://BiBiServ.TechFak.Uni-Bielefeld.DE/reputer/.
Stefan has moved so the sofware might have moved as well.  Enjoy!