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bioinfo Namespace Reference

bioinformatics generic programming toolkit. More...


Compounds

class  bioinfo::bio_bit_traits
 "char_traits" specification for bit encoded bio sequence characters. More...

struct  bioinfo::ci_char_traits
 ci_char_traits : defines case insenstive "char traits". More...

class  bioinfo::fasta
 fasta : read and write multi fasta files. More...

class  bioinfo::fasta_seq
 fasta_seq : represents a sequence type (seqtype) and a string identifier corresponding to the header in a fasta_seq file. More...

class  bioinfo::na_nmer_overlap
 na_nmer_traits defines character traits for a bit compressed n-length nucleic acid character sequence where a series of these character sequences are overlapping. More...

struct  bioinfo::nmer_string
 nmer_string represents a string as a series of overlapping nmers. More...


[NOHEADER]

typedef std::basic_string<
char, ci_char_traits
ci_string
 case insensitive string.


Detailed Description

bioinformatics generic programming toolkit.

namespace bioinfo is in two groups

See also:
The first group, String Module