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#include "fasta.h" // #include "bit_string.h" // interface file for special strings #include #include #include
using bioinfo::fasta; using bioinfo::nmer_string;
using namespace std;
int main(int argc, char* argv[]) { try {
/** 4 nucleic acid character codes (2 bits for now).
- See also:
- nmer_string, na_nmer_overlap
making the nmer_string 6 bits results in 3 nucleic acids per "character" (3-mer)