Research Publications

Pages

2005
MacLeod A., Tweedie A., McLellan S., Taylor S., Hall N., Berriman M., El‐Sayed NM, Hope M., Turner C.MR, Tait A.. 2005. The genetic map and comparative analysis with the physical map of Trypanosoma brucei. Nucleic acids researchNucleic Acids Research. 33 Google Scholar BibTeX EndNote XML RIS
Berriman M., Ghedin E., Hertz-Fowler C., Blandin G., Renauld H., Bartholomeu D.C, Lennard N.J, Caler E., Hamlin N.E, Haas B. et al.. 2005. The genome of the African trypanosome Trypanosoma brucei. ScienceScience. 309 Google Scholar BibTeX EndNote XML RIS
Loftus B., Anderson I., Davies R., Alsmark U.CM, Samuelson J., Amedeo P., Roncaglia P., Berriman M., Hirt R.P, Mann B.J et al.. 2005. The genome of the protist parasite Entamoeba histolytica. NatureNature. 433 Google Scholar BibTeX EndNote XML RIS
El‐Sayed NM, Myler P.J, Bartholomeu D.C, Nilsson D., Aggarwal G., Tran A.N, Ghedin E., Worthey E.A, Delcher A.L, Blandin G. et al.. 2005. The genome sequence of Trypanosoma cruzi, etiologic agent of Chagas disease. ScienceScience. 309 Google Scholar BibTeX EndNote XML RIS
Boonyaratanakornkit BB, Simpson AJ, Whitehead TA, Fraser CM, el-Sayed NMA, Clark DS. 2005. Transcriptional profiling of the hyperthermophilic methanarchaeon Methanococcus jannaschii in response to lethal heat and non-lethal cold shock.. Environ Microbiol. 7(6):789-97. PubMed DOI Google Scholar BibTeX EndNote XML RIS
Boonyaratanakornkit BB, Simpson AJ, Whitehead TA, Fraser CM, El‐Sayed NM, Clark DS. 2005. Transcriptional profiling of the hyperthermophilic methanarchaeon Methanococcus jannaschii in response to lethal heat and non‐lethal cold shock. Environmental MicrobiologyEnvironmental Microbiology. 7 Google Scholar BibTeX EndNote XML RIS
Egerstedt M., Balch T., Dellaert F., Delmotte F., Khan Z.. 2005. What Are the Ants Doing? Vision-Based Tracking and Reconstruction of Control Programs 2005 IEEE International Conference on Robotics and AutomationProceedings of the 2005 IEEE International Conference on Robotics and Automation. DOI Google Scholar BibTeX EndNote XML RIS
Barry JD, Marcello L, Morrison LJ, Read AF, Lythgoe K, Jones N, Carrington M, Blandin G, Böhme U, Caler E et al.. 2005. What the genome sequence is revealing about trypanosome antigenic variation.. Biochem Soc Trans. 33(Pt 5):986-9. PubMed DOI Google Scholar BibTeX EndNote XML RIS
Joardar V, Lindeberg M, Jackson RW, Selengut J., Dodson R, Brinkac LM, Daugherty SC, Deboy R, A. Durkin S, Giglio MGwinn et al.. 2005. Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition. Journal of bacteriologyJournal of bacteriology. 187 Google Scholar BibTeX EndNote XML RIS

2004
Cummings MP. 2004. A book like its cover. HeredityHeredity. 93 Google Scholar BibTeX EndNote XML RIS
Cummings MP. 2004. A book like its cover –- The Phylogenetic Handbook: A Practical Approach to DNA and Protein Phylogeny, Edited by M. Salemi and A.-M. Vandamme. Heredity. 93:234-235. Google Scholar BibTeX EndNote XML RIS
Bafna V, Gusfield D, Hannenhalli S, Yooseph S. 2004. A Note on Efficient Computation of Haplotypes via Perfect Phylogeny. Journal of Computational BiologyJournal of Computational Biology. 11 Google Scholar BibTeX EndNote XML RIS
Khan Z., Balch T., Dellaert F.. 2004. A Rao-Blackwellized particle filter for eigentracking. Proceedings of the 2004 IEEE Computer Society Conference on Computer Vision and Pattern Recognition, 2004. CVPR 2004.Proceedings of the 2004 IEEE Computer Society Conference on Computer Vision and Pattern Recognition, 2004. CVPR 2004.. DOI Google Scholar BibTeX EndNote XML RIS
Chazelle B., Kingsford C, Singh M.. 2004. A semidefinite programming approach to side chain positioning with new rounding strategies. INFORMS Journal on ComputingINFORMS Journal on Computing. 16 Google Scholar BibTeX EndNote XML RIS
Colwell RR. 2004. A Tangled Bank: Reflections on the Tree of Life and Human Health. Assembling the Tree of LifeAssembling the Tree of Life. Google Scholar BibTeX EndNote XML RIS
Hashmi N., Lee S., Cummings MP. 2004. Abstracting workflows: unifying bioinformatics task conceptualization and specification through Semantic Web services. W3C Workshop on Semantic Web for Life Sciences. Google Scholar BibTeX EndNote XML RIS
Snellman E.A, Colwell RR. 2004. Acinetobacter lipases: molecular biology, biochemical properties and biotechnological potential. Journal of industrial microbiology & biotechnologyJournal of industrial microbiology & biotechnology. 31 Google Scholar BibTeX EndNote XML RIS
El‐Sayed NM, Bartholomeu D, Ivens A, Johnston DA, LoVerde PT. 2004. Advances in schistosome genomics. Trends in ParasitologyTrends in Parasitology. 20 Google Scholar BibTeX EndNote XML RIS
Cummings MP, Myers D.S, Mangelson M.. 2004. Applying permutation tests to tree-based statistical models: extending the R package rpart. 2004-24 Google Scholar BibTeX EndNote XML RIS
Ishimori N., Walsh K., Zheng X., Lu F., Hannenhalli S, Nusskern D., Mural R., Paigen B.. 2004. CHARACTERIZATION OF< i> Ath17, A QUANTITATIVE TRAIT LOCUS FOR ATHEROSCLEROSIS SUSCEPTIBILITY BETWEEN C57BL/6J AND 129S1/SvImJ; SINGLE-NUCLEOTIDE POLYMORPHISMS HAVE IMPORTANT IMPLICATIONS ON IDENTIFYING ATHEROSCLEROSIS MODIFIER GENES. Cardiovascular PathologyCardiovascular Pathology. 13 Google Scholar BibTeX EndNote XML RIS

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